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School of Engineering
- Undergraduate major in Mechanical Engineering
- Undergraduate major in Systems and Control Engineering
- Undergraduate major in Electrical and Electronic Engineering
- Undergraduate major in Information and Communications Engineering
- Undergraduate major in Industrial Engineering and Economics
- Common courses
- School of Materials and Chemical Technology
- School of Computing
- School of Life Science and Technology
- School of Environment and Society
- 工学院，物質理工学院，環境・社会理工学院共通科目
- Liberal arts and basic science courses
- First-Year Courses
- School of Science
- School of Engineering
- School of Materials and Chemical Technology
- School of Computing
- School of Life Science and Technology
-
School of Environment and Society
- Department of Architecture and Building Engineering
- Department of Civil and Environmental Engineering
- Department of Transdisciplinary Science and Engineering
- Department of Social and Human Sciences
- Department of Innovation Science
- Graduate major in Technology and Innovation Management
- Common courses
- Liberal arts and basic science courses
- Academic unit or major
- Undergraduate major in Life Science and Technology
- Instructor(s)
- Itoh Takehiko Sakurai Minoru Yamada Takuji Kitao Akio
- Class Format
- Lecture
- Media-enhanced courses
- Day/Period(Room No.)
- Tue3-4(H121) Fri3-4(H121)
- Group
- -
- Course number
- LST.A246
- Credits
- 2
- Academic year
- 2019
- Offered quarter
- 4Q
- Syllabus updated
- 2019/12/10
- Lecture notes updated
- -
- Language used
- Japanese
- Access Index
-
Course description and aims
This course focuses on the basics of bioinformatics, which is an integrated field of life science and information technology.
Sakurai: 12/6, 12/13, 12/17, 12/20
Yamada: 11/29, 12/3, 12/10
Kitao: 12/24, 1/7, 1/10, 1/14, 1/21, 1/24, 1/28, 1/31
Student learning outcomes
Sakurai:
Yamada:
Kitao:
Keywords
Bioinformatics, database, sequence analysis, phylogenetic analysis
Calculus, thermodiyancs, Eigenvalue problem, variational method, analytical mechanics, statistical mechanics
Competencies that will be developed
| ✔ Specialist skills | Intercultural skills | Communication skills | Critical thinking skills | ✔ Practical and/or problem-solving skills |
Class flow
Lecture is given for each topic, followed by some practices when necessary.
Course schedule/Required learning
| Course schedule | Required learning | |
|---|---|---|
| Class 1 | Yamada 1 | |
| Class 2 | Yamada 2 | |
| Class 3 | Sakurai 1 | |
| Class 4 | Yamada 3 | |
| Class 5 | Sakurai 2 | |
| Class 6 | Sakurai 3 | |
| Class 7 | Sakurai 4 | |
| Class 8 | Microscopic states and probability (Kitao 1) | Understand probability and microscopic states |
| Class 9 | Kitao 2 | |
| Class 10 | Kitao 3 | |
| Class 11 | Kitao 4 | |
| Class 12 | Kitao 5 | |
| Class 13 | Kitao 6 | |
| Class 14 | Kitao 7 | |
| Class 15 | Kitao 8 |
Textbook(s)
None.
Reference books, course materials, etc.
Japanese Society of Bioinformatics. Bioinformatics Nyumon (Japanese), ISBN-13: 978-4766422511
David Mount. Bioinformatics: Sequence and Genome Analysis 2nd Edition, ISBN-13: 978-0879697129
Assessment criteria and methods
Assignment and Exam
Related courses
- LST.A241 ： Biostatistics
- LST.A351 ： Genome Informatics
Prerequisites (i.e., required knowledge, skills, courses, etc.)
None.
